MolNFT v1 · #118892 · protein
Crystal structure of surfactant protein-a complexed with phosphocholine
5FFR · Pulmonary surfactant-associated protein a: “Crystal structure of surfactant protein-a complexed with phosphocholine”. X-ray diffraction, 3 ligands (PC, CA, NA). MolNFT v1 #118892 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5FFR
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pulmonary surfactant-associated protein a
- UniProt
- P08427
- Ligands
- PC, CA, NA
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pulmonary surfactant-associated protein a | protein | 142 | 31% helix, 29% strand | P08427 |
Ligands and binding sites
- PC · Phosphocholine · ligand · chains A
- CA · Calcium ion · metal · chains A
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 disulfide, 2 modified (disulfide, nonstandard).
Compared structures
- 5FFR · Crystal Structure of Surfactant Protein-A complexed with phosphocholine · the same entry in another collection · chain A against A, TM-score 1.00
- P08427 · AlphaFold monomer V2.0 prediction for pulmonary surfactant-associated protein a (P08427) · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08427
- Elsewhere: RCSB PDB 5FFR · PDBe 5FFR · UniProt P08427
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.