MolNFT v1 · #115933 · protein
Structure of a lipocalin lipoprotein affecting virulence in streptococcus pneumoniae
5CYB: “Structure of a lipocalin lipoprotein affecting virulence in streptococcus pneumoniae”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #115933 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5CYB
- Type
- protein
- Length
- 89 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lipoprotein
- UniProt
- A0A0T8N286
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipoprotein | protein | 89 | 3% helix, 58% strand | A0A0T8N286 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A
- GOL · Glycerol · additive · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5CYB · Structure of a lipocalin lipoprotein affecting virulence in Streptococcus pneumoniae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0T8N286
- Elsewhere: RCSB PDB 5CYB · PDBe 5CYB · UniProt A0A0T8N286
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