MolNFT v1 · #115851 · protein
Crystal structure of rtx domain block V of adenylate cyclase toxin from bordetella pertussis
5CVW · Bifunctional HEMOLYSIN/ADENYLATE cyclase: “Crystal structure of rtx domain block V of adenylate cyclase toxin from bordetella pertussis”. X-ray diffraction, 2 ligands (CA, MG). MolNFT v1 #115851 on GenesisL1: 3D structure, binding…
- PDB
- 5CVW
- Type
- protein
- Length
- 150 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bifunctional HEMOLYSIN/ADENYLATE cyclase
- EC
- 4.6.1.1
- UniProt
- J7QLC0
- Ligands
- CA, MG
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bifunctional HEMOLYSIN/ADENYLATE cyclase (EC 4.6.1.1) | protein | 150 | 12% helix, 39% strand | J7QLC0 |
Ligands and binding sites
- CA · Calcium ion · metal · 8 copies · chains A
- MG · Magnesium ion · metal · 2 copies · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5CVW · Crystal structure of rtx domain block V of adenylate cyclase toxin from bordetella… · the same entry in another collection · chain A against A, TM-score 1.00
- J7QLC0 · AlphaFold monomer V2.0 prediction for bifunctional HEMOLYSIN/ADENYLATE cyclase (J7QLC0) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J7QLC0
- Elsewhere: RCSB PDB 5CVW · PDBe 5CVW · UniProt J7QLC0
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