MolNFT v1 · #115822 · protein

C. remanei pgl-1 dimerization domain - hg

5CV3 · Putative uncharacterized protein: “C. remanei pgl-1 dimerization domain - hg”. X-ray diffraction, 1 ligand (EMC). MolNFT v1 #115822 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5CV3
Type: protein
Length: 234 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: E3M3V1
Ligands: EMC

Structure

x-ray diffraction · 1 distinct chain · 68% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	234	68% helix, 0% strand	E3M3V1

Ligands and binding sites

EMC · Ethyl mercury ion · ligand · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5CV3 · C. remanei PGL-1 Dimerization Domain - Hg · the same entry in another collection · chain A against A, TM-score 1.00
E3M3V1 · AlphaFold monomer V2.0 prediction for guanyl-specific ribonuclease pgl-1 (E3M3V1) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E3M3V1
Elsewhere: RCSB PDB 5CV3 · PDBe 5CV3 · UniProt E3M3V1

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