MolNFT v1 · #115673 · protein
Gtb mutant with mercury - E303C
5CQM · Histo-blood group abo system transferase: “Gtb mutant with mercury - E303C”. X-ray diffraction, 1 ligand (HG), 2 pockets (best druggability 0.49). MolNFT v1 #115673 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5CQM
- Type
- protein
- Length
- 262 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histo-blood group abo system transferase
- EC
- 2.4.1.40, 2.4.1.37
- UniProt
- P16442
- Ligands
- HG
- Pockets
- 2 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Histo-blood group abo system transferase (EC 2.4.1.40, 2.4.1.37) | protein | 262 | 30% helix, 22% strand | P16442 |
Ligands and binding sites
- HG · Mercury (II) ion · metal · 5 copies · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 202 | 0.49 | 0.75 | 30 | HG |
| 2 | 50 | 0.26 | 0.73 | 11 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16442
- Elsewhere: RCSB PDB 5CQM · PDBe 5CQM · UniProt P16442
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