MolNFT v1 · #115278 · protein

C-terminal domain of the R-type pyocin baseplate protein PA0618

5CES: “C-terminal domain of the R-type pyocin baseplate protein PA0618”. X-ray diffraction, 2 pockets (best druggability 0.39). MolNFT v1 #115278 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5CES
Type: protein
Length: 182 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: PA0618
UniProt: G3XCX5
Pockets: 2 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	PA0618	protein	91	33% helix, 36% strand	G3XCX5

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.39	0.76	19	empty
2	114	0.37	0.74	19	empty

Interfaces

1 interface between chains.

A–B · 557 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

5CES · C-terminal domain of the R-type pyocin baseplate protein PA0618 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G3XCX5
Elsewhere: RCSB PDB 5CES · PDBe 5CES · UniProt G3XCX5

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