MolNFT v1 · #115208 · protein
Human cyclophilin D complexed with inhibitor
5CCR · Peptidyl-prolyl cis-trans isomerase F, mitochondrial: “Human cyclophilin D complexed with inhibitor”. X-ray diffraction, 2 ligands (4ZT, K). MolNFT v1 #115208 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5CCR
- Type
- protein
- Length
- 164 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-prolyl cis-trans isomerase F, mitochondrial
- EC
- 5.2.1.8
- UniProt
- P30405
- Ligands
- 4ZT, K
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-prolyl cis-trans isomerase F, mitochondrial (EC 5.2.1.8) | protein | 164 | 15% helix, 32% strand | P30405 |
Ligands and binding sites
- 4ZT · Ethyl N-[(4-aminobenzyl)carbamoyl]-L-methioninate · ligand · chains A
- K · Potassium ion · metal · 2 copies
- PGE · Triethylene glycol · additive · 2 copies · chains A
- FMT · Formic acid · additive · chains A
- PG4 · Tetraethylene glycol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P30405
- Elsewhere: RCSB PDB 5CCR · PDBe 5CCR · UniProt P30405
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