MolNFT v1 · #114626 · protein
Structure of flavin-dependent brominase BMP2
5BVA · Flavin-dependent halogenase: “Structure of flavin-dependent brominase BMP2”. X-ray diffraction, 1 ligand (FAD), 2 pockets (best druggability 0.82). MolNFT v1 #114626 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5BVA
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavin-dependent halogenase
- Ligands
- FAD
- Pockets
- 2 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavin-dependent halogenase | protein | 398 | 41% helix, 27% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 480 | 0.82 | 0.89 | 74 | FAD, EDO |
| 2 | 102 | 0.52 | 0.83 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5BVA · PDBe 5BVA
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