MolNFT v1 · #114269 · protein

Structure of cueo - the signal peptide was truncated by HRV3C protease

5B7F · Blue copper oxidase cueo: “Structure of cueo - the signal peptide was truncated by HRV3C protease”. X-ray diffraction, 2 ligands (CU, CA), 3 pockets (best druggability 0.45). MolNFT v1 #114269 on GenesisL1: 3D structure, binding…

PDB: 5B7F
Type: protein
Length: 463 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Blue copper oxidase cueo
UniProt: P36649
Ligands: CU, CA
Pockets: 3 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Blue copper oxidase cueo	protein	463	11% helix, 42% strand	P36649

Ligands and binding sites

CU · Copper (II) ion · metal · 4 copies · chains A
CA · Calcium ion · metal · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	135	0.45	0.77	22	empty
2	102	0.43	0.78	25	empty
3	78	0.34	0.75	17	empty

Compared structures

5B7F · Structure of CueO - the signal peptide was truncated by HRV3C protease · the same entry in another collection · chain A against A, TM-score 1.00
P36649 · AlphaFold monomer V2.0 prediction for blue copper oxidase cueo (P36649) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36649
Elsewhere: RCSB PDB 5B7F · PDBe 5B7F · UniProt P36649

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