MolNFT v1 · #113970 · protein

32 kda fragment of the flagellar hook protein flge from caulobacter crescentus

5AY6: “32 kda fragment of the flagellar hook protein flge from caulobacter crescentus”. X-ray diffraction, 5 pockets (best druggability 0.47). MolNFT v1 #113970 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5AY6
Type: protein
Length: 606 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flagellar hook protein flge
UniProt: P35806
Pockets: 5 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Flagellar hook protein flge	protein	303	6% helix, 40% strand	P35806

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.47	0.73	40	empty
2	80	0.35	0.75	14	empty
3	98	0.35	0.74	19	empty
4	64	0.33	0.76	17	empty
5	69	0.28	0.73	19	empty

Interfaces

1 interface between chains.

A–B · 169 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

5AY6 · 32 kDa Fragment of the Flagellar hook protein FlgE from Caulobacter crescentus · the same entry in another collection · chain B against B, TM-score 1.00
P35806 · AlphaFold monomer V2.0 prediction for flagellar hook protein flge (P35806) · a predicted model of the same protein · chain B against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P35806
Elsewhere: RCSB PDB 5AY6 · PDBe 5AY6 · UniProt P35806

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