Research workbench

32 kda fragment of the flagellar hook protein flge from caulobacter crescentus

Analyse 32 kda fragment of the flagellar hook protein flge from caulobacter crescentus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5AY6
Type: protein
Length: 606 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Flagellar hook protein flge
UniProt: P35806
Pockets: 5 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Flagellar hook protein flge	protein	303	6% helix, 40% strand	P35806

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	265	0.47	0.73	40	empty
2	80	0.35	0.75	14	empty
3	98	0.35	0.74	19	empty
4	64	0.33	0.76	17	empty
5	69	0.28	0.73	19	empty

Interfaces

1 interface between chains.

A–B · 169 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

5AY6 · 32 kDa Fragment of the Flagellar hook protein FlgE from Caulobacter crescentus · the same entry in another collection · chain B against B, TM-score 1.00
P35806 · AlphaFold monomer V2.0 prediction for flagellar hook protein flge (P35806) · a predicted model of the same protein · chain B against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P35806
Elsewhere: RCSB PDB 5AY6 · PDBe 5AY6 · UniProt P35806

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