MolNFT v1 · #113759 · protein

Structure of mouse endonuclease V

5AOY: “Structure of mouse endonuclease V”. X-ray diffraction, 1 pocket (best druggability 0.44). MolNFT v1 #113759 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5AOY
Type: protein
Length: 239 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endonuclease V
EC: 3.1.26.-
UniProt: Q8C9A2
Pockets: 1 · best druggability 0.44

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endonuclease V (EC 3.1.26.-)	protein	239	33% helix, 25% strand	Q8C9A2

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	154	0.44	0.75	29	empty

Compared structures

5AOY · Structure of mouse Endonuclease V · the same entry in another collection · chain A against A, TM-score 1.00
Q8C9A2 · AlphaFold monomer V2.0 prediction for endonuclease V (Q8C9A2) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8C9A2
Elsewhere: RCSB PDB 5AOY · PDBe 5AOY · UniProt Q8C9A2

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