MolNFT v1 · #113206 · protein

The ultra high resolution structure of a novel alpha-L- arabinofuranosidase (CTGH43) from clostridium thermocellum atcc 27405 with bound trimethyl N-oxide (trs)

5A8C · Carbohydrate binding family 6: “The ultra high resolution structure of a novel alpha-L- arabinofuranosidase (CTGH43) from clostridium…”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.58). MolNFT v1 #113206 on…

PDB: 5A8C
Type: protein
Length: 299 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Carbohydrate binding family 6
EC: 3.2.1.55
UniProt: A3DEX4
Ligands: CA
Pockets: 1 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Carbohydrate binding family 6 (EC 3.2.1.55)	protein	299	3% helix, 45% strand	A3DEX4

Ligands and binding sites

CA · Calcium ion · metal · chains A
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	241	0.58	0.79	32	CA

Compared structures

5A8C · The ultra high resolution structure of a novel alpha-L-arabinofuranosidase (CtGH43) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A3DEX4
Elsewhere: RCSB PDB 5A8C · PDBe 5A8C · UniProt A3DEX4

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.