MolNFT v1 · #11289 · protein

Crystal structure of tel SAM polymer

1JI7 · Ets-related protein TEL1: “Crystal structure of tel SAM polymer”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #11289 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1JI7
Type: protein
Length: 239 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ets-related protein TEL1
UniProt: P41212
Ligands: SO4

Structure

x-ray diffraction · 2 distinct chains · 59% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Ets-related protein TEL1	protein	77	57% helix, 0% strand	P41212
C	Ets-related protein TEL1	protein	85	60% helix, 0% strand	P41212

Ligands and binding sites

SO4 · Sulfate ion · ion · 5 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

2 interfaces between chains.

A–B · 649 Å² buried · 16 hydrogen bonds · protein-protein
B–C · 570 Å² buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

1JI7 · Crystal Structure of TEL SAM Polymer · the same entry in another collection · chain A against A, TM-score 1.00
P41212 · AlphaFold monomer V2.0 prediction for transcription factor ETV6 (P41212) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P41212
Elsewhere: RCSB PDB 1JI7 · PDBe 1JI7 · UniProt P41212

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