MolNFT v1 · #112672 · protein + DNA
Crystal structure of pre-specific restriction endonuclease bsawi-DNA complex
4ZSF · Bsawi endonuclease: “Crystal structure of pre-specific restriction endonuclease bsawi-DNA complex”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.48). MolNFT v1 #112672 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4ZSF
- Type
- protein + DNA
- Length
- 286 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bsawi endonuclease; DNA
- UniProt
- Q6UQ65
- Ligands
- CA
- Pockets
- 1 · best druggability 0.48
Structure
x-ray diffraction · 2 distinct chains · 58% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bsawi endonuclease | protein | 272 | 58% helix, 14% strand | Q6UQ65 |
| B | DNA | dna | 14 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 239 | 0.48 | 0.74 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 465 Ų buried · 10 hydrogen bonds · protein-nucleic
Compared structures
- 4ZSF · Crystal structure of pre-specific restriction endonuclease BsaWI-DNA complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6UQ65
- Elsewhere: RCSB PDB 4ZSF · PDBe 4ZSF · UniProt Q6UQ65
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