MolNFT v1 · #112019 · protein

Crystal structure of a dgl mutant - H51G H131N

4Z8B · Lectin alpha chain: “Crystal structure of a dgl mutant - H51G H131N”. X-ray diffraction, 4 ligands (XMM, CA, MN). MolNFT v1 #112019 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4Z8B
Type: protein
Length: 231 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lectin alpha chain
UniProt: P08902
Ligands: XMM, CA, MN, SO4

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lectin alpha chain	protein	231	4% helix, 46% strand	P08902

Ligands and binding sites

XMM · 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside · ligand · chains A
CA · Calcium ion · metal · chains A
MN · Manganese (II) ion · metal · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4Z8B · crystal structure of a DGL mutant - H51G H131N · the same entry in another collection · chain A against A, TM-score 1.00
P08902 · AlphaFold monomer V2.0 prediction for lectin alpha chain (P08902) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08902
Elsewhere: RCSB PDB 4Z8B · PDBe 4Z8B · UniProt P08902

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