MolNFT v1 · #111324 · protein

Iron free succinate bound rat cysteine dioxygenase

4YNI · Cysteine dioxygenase type 1: “Iron free succinate bound rat cysteine dioxygenase”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #111324 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4YNI
Type: protein
Length: 187 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cysteine dioxygenase type 1
EC: 1.13.11.20
UniProt: P21816
Ligands: NA

Structure

x-ray diffraction · 1 distinct chain · 15% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cysteine dioxygenase type 1 (EC 1.13.11.20)	protein	187	15% helix, 36% strand	P21816

Ligands and binding sites

NA · Sodium ion · metal · chains A
SIN · Succinic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4YNI · Iron free succinate bound rat cysteine dioxygenase · the same entry in another collection · chain A against A, TM-score 1.00
P21816 · AlphaFold monomer V2.0 prediction for cysteine dioxygenase type 1 (P21816) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21816
Elsewhere: RCSB PDB 4YNI · PDBe 4YNI · UniProt P21816

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