MolNFT v1 · #111061 · protein + DNA
HU38-20BP
4YFH · DNA-binding protein hu-alpha: “HU38-20BP”. X-ray diffraction. MolNFT v1 #111061 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4YFH
- Type
- protein + DNA
- Length
- 184 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-binding protein hu-alpha; Synthetic DNA strand
- UniProt
- P0ACF2
Structure
x-ray diffraction · 4 distinct chains · 45% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding protein hu-alpha | protein | 74 | 49% helix, 24% strand | P0ACF2 |
| B | DNA-binding protein hu-alpha | protein | 87 | 41% helix, 24% strand | P0ACF2 |
| C | Synthetic DNA strand | dna | 11 | — | — |
| D | Synthetic DNA strand | dna | 12 | — | — |
Interfaces
3 interfaces between chains.
- A–B · 1804 Ų buried · 6 hydrogen bonds · protein-protein
- A–C · 237 Ų buried · 6 hydrogen bonds · protein-nucleic
- B–D · 203 Ų buried · 5 hydrogen bonds · protein-nucleic
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ACF2
- Elsewhere: RCSB PDB 4YFH · PDBe 4YFH · UniProt P0ACF2
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