MolNFT v1 · #109849 · protein
Crystal structure of a transketolase from pseudomonas aeruginosa
4XEU: “Crystal structure of a transketolase from pseudomonas aeruginosa”. X-ray diffraction, 1 ligand (CA), 4 pockets (best druggability 0.55). MolNFT v1 #109849 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4XEU
- Type
- protein
- Length
- 632 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transketolase
- EC
- 2.2.1.1
- UniProt
- Q9I5Y8
- Ligands
- CA
- Pockets
- 4 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transketolase (EC 2.2.1.1) | protein | 632 | 48% helix, 14% strand | Q9I5Y8 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 199 | 0.55 | 0.80 | 42 | EDO |
| 2 | 71 | 0.34 | 0.76 | 19 | empty |
| 3 | 67 | 0.33 | 0.76 | 20 | empty |
| 4 | 77 | 0.32 | 0.73 | 12 | empty |
Compared structures
- 4XEU · Crystal structure of a transketolase from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9I5Y8
- Elsewhere: RCSB PDB 4XEU · PDBe 4XEU · UniProt Q9I5Y8
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