MolNFT v1 · #109689 · protein

Crystal structure of AVIO1 from streptomyces viridochromogenes TUE57

4XAA · Putative oxygenase: “Crystal structure of AVIO1 from streptomyces viridochromogenes TUE57”. X-ray diffraction, 1 ligand (NI), 1 pocket (best druggability 0.65). MolNFT v1 #109689 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 4XAA
Type: protein
Length: 221 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative oxygenase
UniProt: Q93KW4
Ligands: NI
Pockets: 1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative oxygenase	protein	221	29% helix, 29% strand	Q93KW4

Ligands and binding sites

NI · Nickel (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	241	0.65	0.82	41	NI

Compared structures

4XAA · Crystal Structure of AviO1 from Streptomyces viridochromogenes Tue57 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q93KW4
Elsewhere: RCSB PDB 4XAA · PDBe 4XAA · UniProt Q93KW4

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