MolNFT v1 · #109670 · protein

Mnsod-3 room temperature structure

4X9Q · Superoxide dismutase [mn] 2, mitochondrial: “Mnsod-3 room temperature structure”. X-ray diffraction, 2 ligands (MN, SO4). MolNFT v1 #109670 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4X9Q
Type: protein
Length: 388 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Superoxide dismutase [mn] 2, mitochondrial
EC: 1.15.1.1
UniProt: P41977
Ligands: MN, SO4

Structure

x-ray diffraction · 1 distinct chain · 57% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	Superoxide dismutase [mn] 2, mitochondrial (EC 1.15.1.1)	protein	194	57% helix, 13% strand	P41977

Ligands and binding sites

MN · Manganese (II) ion · metal · 2 copies · chains A, C
SO4 · Sulfate ion · ion · chains C
MLI · Malonate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–C · 996 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

4X9Q · MnSOD-3 Room Temperature Structure · the same entry in another collection · chain A against A, TM-score 1.00
P41977 · AlphaFold monomer V2.0 prediction for superoxide dismutase [mn] 2, mitochondrial (P41977) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P41977
Elsewhere: RCSB PDB 4X9Q · PDBe 4X9Q · UniProt P41977

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