MolNFT v1 · #108833 · protein

Crystal structure of SUMO1 in complex with phosphorylated pml

4WJN · Small ubiquitin-related modifier 1: “Crystal structure of SUMO1 in complex with phosphorylated pml”. X-ray diffraction. MolNFT v1 #108833 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4WJN
Type: protein
Length: 94 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small ubiquitin-related modifier 1; Protein pml
UniProt: P63165, P29590

Structure

x-ray diffraction · 2 distinct chains · 19% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small ubiquitin-related modifier 1	protein	77	23% helix, 32% strand	P63165
B	Protein pml	protein	17	0% helix, 18% strand	P29590

Interfaces

1 interface between chains.

A–B · 610 Å² buried · 11 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 3 modified (phosphorylation).

Compared structures

4WJN · Crystal structure of SUMO1 in complex with phosphorylated PML · the same entry in another collection · chain A against A, TM-score 1.00
P63165 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 1 (P63165) · a predicted model of the same protein · chain A against A, TM-score 0.96
P29590 · AlphaFold monomer V2.0 prediction for protein pml (P29590) · a predicted model of the same protein · chain B against A, TM-score 0.27

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P63165
Every structure of UniProt P29590
Elsewhere: RCSB PDB 4WJN · PDBe 4WJN · UniProt P63165 · UniProt P29590

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