MolNFT v1 · #108677 · protein

High-resolution structure of synaptotagmin 1 C2A

4WEE · Synaptotagmin-1: “High-resolution structure of synaptotagmin 1 C2A”. X-ray diffraction, 2 ligands (NA, SO4). MolNFT v1 #108677 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4WEE
Type: protein
Length: 135 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Synaptotagmin-1
UniProt: P21707
Ligands: NA, SO4

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Synaptotagmin-1	protein	135	12% helix, 45% strand	P21707

Ligands and binding sites

NA · Sodium ion · metal · 7 copies · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4WEE · High-resolution structure of Synaptotagmin 1 C2A · the same entry in another collection · chain A against A, TM-score 1.00
P21707 · AlphaFold monomer V2.0 prediction for synaptotagmin-1 (P21707) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21707
Elsewhere: RCSB PDB 4WEE · PDBe 4WEE · UniProt P21707

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