MolNFT v1 · #108084 · protein

Human galectin-7 in complex with a galactose based dendron D1.

4UW3: “Human galectin-7 in complex with a galactose based dendron D1.”. X-ray diffraction, 1 ligand (50G), 2 pockets (best druggability 0.35). MolNFT v1 #108084 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4UW3
Type: protein
Length: 266 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Human galectin-7
UniProt: P47929
Ligands: 50G
Pockets: 2 · best druggability 0.35

Structure

x-ray diffraction · 2 distinct chains · 2% helix, 54% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Human galectin-7	protein	134	2% helix, 54% strand	P47929
B	Human galectin-7	protein	132	2% helix, 55% strand	P47929

Ligands and binding sites

50G · Dendron-D1 · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	57	0.35	0.79	19	empty
2	66	0.31	0.74	15	empty

Interfaces

1 interface between chains.

A–B · 802 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

4UW3 · Human galectin-7 in complex with a galactose based dendron D1. · the same entry in another collection · chain A against A, TM-score 1.00
P47929 · AlphaFold monomer V2.0 prediction for galectin-7 (P47929) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P47929
Elsewhere: RCSB PDB 4UW3 · PDBe 4UW3 · UniProt P47929

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