MolNFT v1 · #106485 · protein

Crystal structure of the autoinhibited dimer of pro-apoptotic bax (II)

4S0P · Apoptosis regulator bax: “Crystal structure of the autoinhibited dimer of pro-apoptotic bax (II)”. X-ray diffraction, 6 pockets (best druggability 0.54). MolNFT v1 #106485 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 4S0P
Type: protein
Length: 348 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Apoptosis regulator bax
UniProt: Q07812
Pockets: 6 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 70% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Apoptosis regulator bax	protein	174	70% helix, 0% strand	Q07812

Pockets

6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	124	0.54	0.82	18	empty
2	164	0.51	0.78	18	empty
3	101	0.42	0.77	14	empty
4	62	0.40	0.80	15	empty
5	71	0.39	0.78	16	empty

Interfaces

1 interface between chains.

A–B · 687 Å² buried · 14 hydrogen bonds · protein-protein

Compared structures

4S0P · Crystal Structure of the Autoinhibited Dimer of Pro-apoptotic BAX (II) · the same entry in another collection · chain A against A, TM-score 1.00
Q07812 · AlphaFold monomer V2.0 prediction for apoptosis regulator bax (Q07812) · a predicted model of the same protein · chain B against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q07812
Elsewhere: RCSB PDB 4S0P · PDBe 4S0P · UniProt Q07812

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