MolNFT v1 · #106394 · protein
Crystal structure of carbohydrate transporter solute binding protein CAUR_1924 from chloroflexus aurantiacus, target efi-511158, in complex with D-glucose
4RXU · Periplasmic sugar-binding protein: “Crystal structure of carbohydrate transporter solute binding protein CAUR_1924 from chloroflexus aurantiacus…”. X-ray diffraction, 1 ligand (BGC), 2 pockets (best druggability 0.61). MolNFT v1…
- PDB
- 4RXU
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Periplasmic sugar-binding protein
- UniProt
- A9WDY0
- Ligands
- BGC
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic sugar-binding protein | protein | 340 | 44% helix, 21% strand | A9WDY0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.61 | 0.91 | 22 | BGC |
| 2 | 51 | 0.27 | 0.74 | 13 | empty |
Compared structures
- 4RXU · Crystal structure of carbohydrate transporter solute binding protein CAUR_1924 from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9WDY0
- Elsewhere: RCSB PDB 4RXU · PDBe 4RXU · UniProt A9WDY0
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