MolNFT v1 · #106226 · protein

The structure of the effector protein from pseudomonas syringae pv. tomato strain DC3000

4RSX · Type III effector HOPA1: “The structure of the effector protein from pseudomonas syringae pv. tomato strain DC3000”. X-ray diffraction, 2 pockets (best druggability 0.53). MolNFT v1 #106226 on GenesisL1: 3D structure, binding sites…

PDB: 4RSX
Type: protein
Length: 257 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Type III effector HOPA1
UniProt: Q87UE5
Pockets: 2 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type III effector HOPA1	protein	257	45% helix, 17% strand	Q87UE5

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	191	0.53	0.78	31	empty
2	57	0.32	0.76	17	empty

Compared structures

4RSX · The structure of the effector protein from Pseudomonas syringae pv. tomato strain DC3000 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q87UE5
Elsewhere: RCSB PDB 4RSX · PDBe 4RSX · UniProt Q87UE5

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