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The structure of the effector protein from pseudomonas syringae pv. tomato strain DC3000
Analyse The structure of the effector protein from pseudomonas syringae pv. tomato… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4RSX
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Type III effector HOPA1
- UniProt
- Q87UE5
- Pockets
- 2 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type III effector HOPA1 | protein | 257 | 45% helix, 17% strand | Q87UE5 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 191 | 0.53 | 0.78 | 31 | empty |
| 2 | 57 | 0.32 | 0.76 | 17 | empty |
Compared structures
- 4RSX · The structure of the effector protein from Pseudomonas syringae pv. tomato strain DC3000 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87UE5
- Elsewhere: RCSB PDB 4RSX · PDBe 4RSX · UniProt Q87UE5
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