MolNFT v1 · #105613 · protein

Mycobacterium avium subs paratuberculosis tesb protein MAP1729C

4R9Z · Uncharacterized protein: “Mycobacterium avium subs paratuberculosis tesb protein MAP1729C”. X-ray diffraction, 5 pockets (best druggability 0.63). MolNFT v1 #105613 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4R9Z
Type: protein
Length: 493 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q73Z74
Pockets: 5 · best druggability 0.63

Structure

x-ray diffraction · 2 distinct chains · 18% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	245	19% helix, 42% strand	Q73Z74
B	Uncharacterized protein	protein	248	18% helix, 39% strand	Q73Z74

Pockets

5 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	196	0.63	0.84	33	empty
2	368	0.59	0.76	36	empty
3	251	0.59	0.79	36	empty
4	228	0.57	0.78	24	empty
5	119	0.51	0.81	21	empty

Interfaces

1 interface between chains.

A–B · 2239 Å² buried · 45 hydrogen bonds · protein-protein

Compared structures

4R9Z · Mycobacterium avium subs paratuberculosis tesB protein MAP1729c · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q73Z74
Elsewhere: RCSB PDB 4R9Z · PDBe 4R9Z · UniProt Q73Z74

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