Research workbench
Mycobacterium avium subs paratuberculosis tesb protein MAP1729C
Analyse Mycobacterium avium subs paratuberculosis tesb protein MAP1729C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4R9Z
- Type
- protein
- Length
- 493 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q73Z74
- Pockets
- 5 · best druggability 0.63
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 245 | 19% helix, 42% strand | Q73Z74 |
| B | Uncharacterized protein | protein | 248 | 18% helix, 39% strand | Q73Z74 |
Pockets
5 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 196 | 0.63 | 0.84 | 33 | empty |
| 2 | 368 | 0.59 | 0.76 | 36 | empty |
| 3 | 251 | 0.59 | 0.79 | 36 | empty |
| 4 | 228 | 0.57 | 0.78 | 24 | empty |
| 5 | 119 | 0.51 | 0.81 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 2239 Ų buried · 45 hydrogen bonds · protein-protein
Compared structures
- 4R9Z · Mycobacterium avium subs paratuberculosis tesB protein MAP1729c · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q73Z74
- Elsewhere: RCSB PDB 4R9Z · PDBe 4R9Z · UniProt Q73Z74
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.