MolNFT v1 · #105069 · protein

Structure of a xanthomonas type IV secretion system related protein

4QTQ · XAC2610 protein: “Structure of a xanthomonas type IV secretion system related protein”. X-ray diffraction, 1 ligand (CA), 2 pockets (best druggability 0.36). MolNFT v1 #105069 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 4QTQ
Type: protein
Length: 209 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: XAC2610 protein
UniProt: Q8PJC5
Ligands: CA
Pockets: 2 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	XAC2610 protein	protein	209	4% helix, 49% strand	Q8PJC5

Ligands and binding sites

CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.36	0.76	19	empty
2	55	0.25	0.73	19	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

4QTQ · Structure of a Xanthomonas Type IV Secretion System related protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8PJC5
Elsewhere: RCSB PDB 4QTQ · PDBe 4QTQ · UniProt Q8PJC5

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