MolNFT v1 · #104828 · protein
The XMAP215 family drives microtubule polymerization using a structurally diverse tog array
4QMH · LP04448P: “The XMAP215 family drives microtubule polymerization using a structurally diverse tog array”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.29). MolNFT v1 #104828 on GenesisL1: 3D structure, binding…
- PDB
- 4QMH
- Type
- protein
- Length
- 236 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LP04448P
- UniProt
- Q9VEZ3
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.29
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | LP04448P | protein | 236 | 75% helix, 1% strand | Q9VEZ3 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.29 | 0.75 | 13 | empty |
Compared structures
- 4QMH · The XMAP215 family drives microtubule polymerization using a structurally diverse TOG… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9VEZ3 · AlphaFold monomer V2.0 prediction for protein mini spindles (Q9VEZ3) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VEZ3
- Elsewhere: RCSB PDB 4QMH · PDBe 4QMH · UniProt Q9VEZ3
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