MolNFT v1 · #104104 · protein
Crystal structure of the fifth bromodomain of human poly-bromodomain containing protein 1 (PB1) in complex with a hydroxyphenyl-propenone ligand
4Q0O · Protein polybromo-1: “Crystal structure of the fifth bromodomain of human poly-bromodomain containing protein 1 (PB1) in complex…”. X-ray diffraction, 2 ligands (2XC, K). MolNFT v1 #104104 on GenesisL1: 3D structure, binding sites…
- PDB
- 4Q0O
- Type
- protein
- Length
- 115 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein polybromo-1
- UniProt
- Q86U86
- Ligands
- 2XC, K
Structure
x-ray diffraction · 1 distinct chain · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein polybromo-1 | protein | 115 | 63% helix, 2% strand | Q86U86 |
Ligands and binding sites
- 2XC · (2E)-1-(2-hydroxyphenyl)-3-[(3R)-3-phenylpiperidin-1-yl]prop-2-en-1-one · ligand · chains A
- K · Potassium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4Q0O · Crystal Structure of the fifth bromodomain of Human Poly-bromodomain containing protein 1… · the same entry in another collection · chain A against A, TM-score 1.00
- Q86U86 · AlphaFold monomer V2.0 prediction for protein polybromo-1 (Q86U86) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86U86
- Elsewhere: RCSB PDB 4Q0O · PDBe 4Q0O · UniProt Q86U86
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