MolNFT v1 · #103999 · protein
Crystallographic structure of the lzii fragment (anti-parallel orientation) from JIP3
4PXJ · C-jun-amino-terminal kinase-interacting protein 3: “Crystallographic structure of the lzii fragment (anti-parallel orientation) from JIP3”. X-ray diffraction, 2 ligands (GAI, SO4). MolNFT v1 #103999 on GenesisL1: 3D structure…
- PDB
- 4PXJ
- Type
- protein
- Length
- 174 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- C-jun-amino-terminal kinase-interacting protein 3
- UniProt
- Q9UPT6
- Ligands
- GAI, SO4
Structure
x-ray diffraction · 3 distinct chains · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | C-jun-amino-terminal kinase-interacting protein 3 | protein | 56 | 96% helix, 0% strand | Q9UPT6 |
| B | C-jun-amino-terminal kinase-interacting protein 3 | protein | 57 | 95% helix, 0% strand | Q9UPT6 |
| C | C-jun-amino-terminal kinase-interacting protein 3 | protein | 61 | 87% helix, 0% strand | Q9UPT6 |
Ligands and binding sites
- GAI · Guanidine · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 2 copies · chains A, B, C
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- A–B · 1403 Ų buried · 4 hydrogen bonds · protein-protein
- A–C · 406 Ų buried · 3 hydrogen bonds · protein-protein
- B–C · 108 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 4PXJ · Crystallographic structure of the LZII fragment (anti-parallel orientation) from JIP3 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UPT6 · AlphaFold monomer V2.0 prediction for C-jun-amino-terminal kinase- interacting protein 3… · a predicted model of the same protein · chain B against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UPT6
- Elsewhere: RCSB PDB 4PXJ · PDBe 4PXJ · UniProt Q9UPT6
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