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MolNFT v1 · #103830 · protein

PIH1D1 N-terminal domain

4PSF · PIH1 domain-containing protein 1: “PIH1D1 N-terminal domain”. X-ray diffraction, 4 pockets (best druggability 0.46). MolNFT v1 #103830 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
4PSF
Type
protein
Length
268 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
PIH1 domain-containing protein 1
UniProt
Q9NWS0
Pockets
4 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 30% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BPIH1 domain-containing protein 1protein13428% helix, 30% strandQ9NWS0

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12020.460.7443empty
2770.370.7613empty
3620.360.7821empty
41060.350.7315empty

Interfaces

1 interface between chains.

  • A–B · 372 Ų buried · 10 hydrogen bonds · protein-protein

Compared structures

  • 4PSF · PIH1D1 N-terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9NWS0 · AlphaFold monomer V2.0 prediction for PIH1 domain-containing protein 1 (Q9NWS0) · a predicted model of the same protein · chain A against A, TM-score 0.91

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