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MolNFT v1 · #103748 · protein

Engineered dual specific vhh antibody in complex with a nickel (II) ion

4PPT · Engineered single domain vhh antibody: “Engineered dual specific vhh antibody in complex with a nickel (II) ion”. X-ray diffraction, 2 ligands (NI, SO4). MolNFT v1 #103748 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
4PPT
Type
protein
Length
121 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Engineered single domain vhh antibody
Ligands
NI, SO4

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEngineered single domain vhh antibodyprotein1217% helix, 50% strand—

Ligands and binding sites

  • NI · Nickel (II) ion · metal · chains A
  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 4PPT · Engineered Dual Specific VHH Antibody in Complex with a Nickel (II) Ion · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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