MolNFT v1 · #103512 · protein
Homocysteine bound cysteine dioxygenase C93A variant at pH 6.2
4PIY · Cysteine dioxygenase type 1: “Homocysteine bound cysteine dioxygenase C93A variant at pH 6.2”. X-ray diffraction, 2 ligands (HCS, FE), 1 pocket (best druggability 0.54). MolNFT v1 #103512 on GenesisL1: 3D structure, binding sites…
- PDB
- 4PIY
- Type
- protein
- Length
- 186 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cysteine dioxygenase type 1
- EC
- 1.13.11.20
- UniProt
- P21816
- Ligands
- HCS, FE
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cysteine dioxygenase type 1 (EC 1.13.11.20) | protein | 186 | 17% helix, 37% strand | P21816 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.54 | 0.85 | 30 | FE, HCS |
Compared structures
- 4PIY · Homocysteine bound Cysteine Dioxygenase C93A variant at pH 6.2 · the same entry in another collection · chain A against A, TM-score 1.00
- P21816 · AlphaFold monomer V2.0 prediction for cysteine dioxygenase type 1 (P21816) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21816
- Elsewhere: RCSB PDB 4PIY · PDBe 4PIY · UniProt P21816
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