MolNFT v1 · #102949 · protein
Crystal structure of the bateman domain of murine magnesium transporter CNNM2 bound to AMP
4P1G · Metal transporter CNNM2: “Crystal structure of the bateman domain of murine magnesium transporter CNNM2 bound to AMP”. X-ray diffraction, 1 ligand (AMP), 1 pocket (best druggability 0.36). MolNFT v1 #102949 on GenesisL1: 3D…
- PDB
- 4P1G
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Metal transporter CNNM2
- UniProt
- Q3TWN3
- Ligands
- AMP
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Metal transporter CNNM2 | protein | 152 | 39% helix, 27% strand | Q3TWN3 |
Ligands and binding sites
- AMP · Adenosine monophosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.36 | 0.79 | 13 | AMP |
Compared structures
- 4P1G · Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to AMP · the same entry in another collection · chain A against A, TM-score 1.00
- Q3TWN3 · AlphaFold monomer V2.0 prediction for metal transporter CNNM2 (Q3TWN3) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3TWN3
- Elsewhere: RCSB PDB 4P1G · PDBe 4P1G · UniProt Q3TWN3
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