MolNFT v1 · #102932 · protein

Structure of the double stranded DNA binding type IV secretion protein tran from enterococcus

4P0Y · AM32: “Structure of the double stranded DNA binding type IV secretion protein tran from enterococcus”. X-ray diffraction, 1 pocket (best druggability 0.46). MolNFT v1 #102932 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 4P0Y
Type: protein
Length: 228 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: AM32
UniProt: Q7BVV5
Pockets: 1 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	AM32	protein	114	46% helix, 21% strand	Q7BVV5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	184	0.46	0.76	31	empty

Interfaces

1 interface between chains.

A–B · 147 Å² buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

4P0Y · Structure of the double stranded DNA binding type IV secretion protein TraN from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7BVV5
Elsewhere: RCSB PDB 4P0Y · PDBe 4P0Y · UniProt Q7BVV5

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