MolNFT v1 · #100821 · protein
Crystal structure of beta-lactamse PENP_E166S
4N92 · Beta-lactamase: “Crystal structure of beta-lactamse PENP_E166S”. X-ray diffraction, 4 pockets (best druggability 0.74). MolNFT v1 #100821 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4N92
- Type
- protein
- Length
- 512 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-lactamase
- EC
- 3.5.2.6
- UniProt
- P00808
- Pockets
- 4 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | Beta-lactamase (EC 3.5.2.6) | protein | 256 | 45% helix, 18% strand | P00808 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1150 | 0.74 | 0.77 | 102 | empty |
| 2 | 73 | 0.47 | 0.83 | 17 | empty |
| 3 | 76 | 0.44 | 0.81 | 17 | empty |
| 4 | 63 | 0.26 | 0.73 | 19 | empty |
Interfaces
1 interface between chains.
- B–A · 589 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00808
- Elsewhere: RCSB PDB 4N92 · PDBe 4N92 · UniProt P00808
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