MolNFT v1 · #100141 · protein
Orthorhombic monellin
4MON: “Orthorhombic monellin”. X-ray diffraction, 1 pocket (best druggability 0.61). MolNFT v1 #100141 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4MON
- Type
- protein
- Length
- 188 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Monellin
- UniProt
- P02881, P02882
- Pockets
- 1 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 14% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Monellin | protein | 44 | 0% helix, 55% strand | P02881 |
| B, D | Monellin | protein | 50 | 26% helix, 32% strand | P02882 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 313 | 0.61 | 0.79 | 30 | empty |
Interfaces
6 interfaces between chains.
- A–B · 1323 Ų buried · 14 hydrogen bonds · protein-protein
- C–D · 1224 Ų buried · 17 hydrogen bonds · protein-protein
- B–D · 317 Ų buried · 1 hydrogen bond · protein-protein
- B–C · 69 Ų buried · 0 hydrogen bonds · protein-protein
- A–D · 65 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 4MON · Orthorhombic monellin · the same entry in another collection · chain A against A, TM-score 1.00
- P02882 · AlphaFold monomer V2.0 prediction for monellin chain B (P02882) · a predicted model of the same protein · chain B against A, TM-score 0.88
- P02881 · AlphaFold monomer V2.0 prediction for monellin chain a (P02881) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02881
- Every structure of UniProt P02882
- Elsewhere: RCSB PDB 4MON · PDBe 4MON · UniProt P02881 · UniProt P02882
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