MolNFT v1 · #542300 · protein
AlphaFold monomer V2.0 prediction for protein zyg-11 homolog B (Q9C0D3)
Q9C0D3: “AlphaFold monomer V2.0 prediction for protein zyg-11 homolog B (Q9C0D3)”. 6 pockets (best druggability 0.67). MolNFT v1 #542300 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9C0D3
- Type
- protein
- Length
- 744 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Protein zyg-11 homolog B
- UniProt
- Q9C0D3
- Pockets
- 6 · best druggability 0.67
Structure
1 distinct chain · 57% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein zyg-11 homolog B | protein | 744 | 57% helix, 6% strand | Q9C0D3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 814 | 0.67 | 0.75 | 81 | empty |
| 2 | 151 | 0.55 | 0.81 | 30 | empty |
| 3 | 63 | 0.44 | 0.82 | 16 | empty |
| 4 | 158 | 0.42 | 0.74 | 21 | empty |
| 5 | 71 | 0.40 | 0.79 | 16 | empty |
Compared structures
- 7EP2 · Crystal structure of ZYG11B bound to GGFN degron · an experimental structure of the same protein · chain A against A, TM-score 0.37
- 7EP2 · Crystal structure of ZYG11B bound to ggfn degron · an experimental structure of the same protein · chain A against A, TM-score 0.37
- 7EP0 · Crystal structure of ZYG11B bound to GSTE degron · an experimental structure of the same protein · chain A against B, TM-score 0.33
- 7EP0 · Crystal structure of ZYG11B bound to gste degron · an experimental structure of the same protein · chain A against A, TM-score 0.33
- 7EP1 · Crystal structure of ZYG11B bound to gflh degron · an experimental structure of the same protein · chain A against B, TM-score 0.32
- 7EP1 · Crystal structure of ZYG11B bound to GFLH degron · an experimental structure of the same protein · chain A against B, TM-score 0.32
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C0D3
- Elsewhere: UniProt Q9C0D3 · AlphaFold DB Q9C0D3
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