MolNFT v1 · #530682 · protein

AlphaFold monomer V2.0 prediction for 5'-deoxynucleotidase YGK1 (P53144)

P53144: “AlphaFold monomer V2.0 prediction for 5'-deoxynucleotidase YGK1 (P53144)”. 1 pocket (best druggability 0.63). MolNFT v1 #530682 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P53144
Type: protein
Length: 215 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule: 5'-deoxynucleotidase YGK1
UniProt: P53144
Pockets: 1 · best druggability 0.63

Structure

1 distinct chain · 67% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	5'-deoxynucleotidase YGK1	protein	215	67% helix, 1% strand	P53144

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	399	0.63	0.78	34	empty

Compared structures

5YOX · Hd domain-containing protein YGK1(YGL101W) · an experimental structure of the same protein · chain A against A, TM-score 0.78

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P53144
Elsewhere: UniProt P53144 · AlphaFold DB P53144

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