UniProt P53144
5'-deoxynucleotidase YGK1 (P53144)
5'-deoxynucleotidase YGK1 (UniProt P53144): 1 experimental structure and 1 predicted model on GenesisL1, 1 ligand bound, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P53144
- Protein
- 5'-deoxynucleotidase YGK1
- Experimental structures
- 1
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 1 · 1 record with a druggable one
Structures
2 records of P53144 in the MolNFT archive: 1 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5YOX | Hd domain-containing protein YGK1(YGL101W) | x-ray diffraction | A, B, C, D, E, F, G, H | ZN | — |
| P53144 | AlphaFold monomer V2.0 prediction for 5'-deoxynucleotidase YGK1 (P53144) | predicted | A | — | 1 (best 0.63) |
Ligands
- ZN · Zinc ion · in 1 record
Experiment against prediction
- 5YOX chain F against the predicted model P53144: TM-score 0.93, RMSD 1.58 Å
- 5YOX chain D against the predicted model P53144: TM-score 0.92, RMSD 1.58 Å
- 5YOX chain B against the predicted model P53144: TM-score 0.92, RMSD 1.51 Å
- 5YOX chain C against the predicted model P53144: TM-score 0.92, RMSD 1.55 Å
- 5YOX chain G against the predicted model P53144: TM-score 0.92, RMSD 1.62 Å
- 5YOX chain A against the predicted model P53144: TM-score 0.91, RMSD 1.79 Å
Elsewhere
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