MolNFT v1 · #530200 · protein

AlphaFold monomer V2.0 prediction for transposon TY1-GR1 gag-pol polyprotein (Q12141)

Q12141: “AlphaFold monomer V2.0 prediction for transposon TY1-GR1 gag-pol polyprotein (Q12141)”. 18 pockets (best druggability 0.80). MolNFT v1 #530200 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q12141
Type: protein
Length: 1,755 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9b4fafb91E864e57DfbcD53390687C2E0DC9e291
Molecule: Transposon TY1-GR1 gag-pol polyprotein
UniProt: Q12141
Pockets: 18 · best druggability 0.80

Structure

1 distinct chain · 27% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transposon TY1-GR1 gag-pol polyprotein	protein	1755	27% helix, 14% strand	Q12141

Pockets

18 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1077	0.80	0.81	113	empty
2	294	0.67	0.82	34	empty
3	672	0.63	0.74	64	empty
4	211	0.60	0.81	32	empty
5	373	0.59	0.76	45	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12141
Elsewhere: UniProt Q12141 · AlphaFold DB Q12141

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