MolNFT v1 · #497879 · protein
AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein 10 (D4D4B1)
D4D4B1: “AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein 10 (D4D4B1)”. 20 pockets (best druggability 0.81). MolNFT v1 #497879 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- D4D4B1
- Type
- protein
- Length
- 1,486 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeF0D3D8E99004dA2f643cd0ce1367dE3512fAd6B
- Molecule
- Vacuolar protein SORTING/TARGETING protein 10
- UniProt
- D4D4B1
- Pockets
- 20 · best druggability 0.81
Structure
1 distinct chain · 9% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vacuolar protein SORTING/TARGETING protein 10 | protein | 1486 | 9% helix, 38% strand | D4D4B1 |
Pockets
20 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1019 | 0.81 | 0.82 | 115 | empty |
| 2 | 115 | 0.77 | 0.96 | 33 | empty |
| 3 | 591 | 0.74 | 0.81 | 52 | empty |
| 4 | 177 | 0.65 | 0.86 | 40 | empty |
| 5 | 187 | 0.63 | 0.84 | 34 | empty |
Modifications
Observed in the structure: 15 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D4D4B1
- Elsewhere: UniProt D4D4B1 · AlphaFold DB D4D4B1
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