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AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING protein 10 (D4D4B1)

Analyse AlphaFold monomer V2.0 prediction for vacuolar protein SORTING/TARGETING… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: D4D4B1
Type: protein
Length: 1,486 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xeF0D3D8E99004dA2f643cd0ce1367dE3512fAd6B
Molecule: Vacuolar protein SORTING/TARGETING protein 10
UniProt: D4D4B1
Pockets: 20 · best druggability 0.81

Structure

1 distinct chain · 9% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vacuolar protein SORTING/TARGETING protein 10	protein	1486	9% helix, 38% strand	D4D4B1

Pockets

20 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1019	0.81	0.82	115	empty
2	115	0.77	0.96	33	empty
3	591	0.74	0.81	52	empty
4	177	0.65	0.86	40	empty
5	187	0.63	0.84	34	empty

Modifications

Observed in the structure: 15 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D4D4B1
Elsewhere: UniProt D4D4B1 · AlphaFold DB D4D4B1

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