MolNFT v1 · #450523 · protein

AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5NMK1)

Q5NMK1: “AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5NMK1)”. 6 pockets (best druggability 0.82). MolNFT v1 #450523 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q5NMK1
Type: protein
Length: 846 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9CD27A59A769D26Ab678c0C0D08E99069bEaB2fd
Molecule: Leucine--tRNA ligase
UniProt: Q5NMK1
Pockets: 6 · best druggability 0.82

Structure

1 distinct chain · 40% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Leucine--tRNA ligase	protein	846	40% helix, 23% strand	Q5NMK1

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1080	0.82	0.83	112	empty
2	77	0.51	0.85	18	empty
3	67	0.50	0.85	18	empty
4	107	0.41	0.77	17	empty
5	89	0.33	0.74	17	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5NMK1
Elsewhere: UniProt Q5NMK1 · AlphaFold DB Q5NMK1

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