Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5NMK1)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5NMK1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5NMK1
- Type
- protein
- Length
- 846 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9CD27A59A769D26Ab678c0C0D08E99069bEaB2fd
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q5NMK1
- Pockets
- 6 · best druggability 0.82
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 846 | 40% helix, 23% strand | Q5NMK1 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1080 | 0.82 | 0.83 | 112 | empty |
| 2 | 77 | 0.51 | 0.85 | 18 | empty |
| 3 | 67 | 0.50 | 0.85 | 18 | empty |
| 4 | 107 | 0.41 | 0.77 | 17 | empty |
| 5 | 89 | 0.33 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NMK1
- Elsewhere: UniProt Q5NMK1 · AlphaFold DB Q5NMK1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.