MolNFT v1 · #450402 · protein

AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (A3DKS1)

A3DKS1: “AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (A3DKS1)”. 8 pockets (best druggability 0.79). MolNFT v1 #450402 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: A3DKS1
Type: protein
Length: 969 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xC5423C95BD2c5b7EB8e3A2f399D357489A01C1e7
Molecule: Leucine--tRNA ligase
UniProt: A3DKS1
Pockets: 8 · best druggability 0.79

Structure

1 distinct chain · 51% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Leucine--tRNA ligase	protein	969	51% helix, 17% strand	A3DKS1

Pockets

8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1099	0.79	0.81	91	empty
2	392	0.66	0.79	37	empty
3	67	0.51	0.85	14	empty
4	176	0.48	0.76	27	empty
5	74	0.43	0.80	13	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A3DKS1
Elsewhere: UniProt A3DKS1 · AlphaFold DB A3DKS1

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